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Ecohydraulics: Fish Passage & Guidance

    Engineering design when the decision making of animals dictates success.

    High–resolution engineering models can create an accurate 'virtual reality' of the hydraulic and water quality environment associated with design or operational alternatives of a dam. A fish swim path selection algorithm, based on cognitive ecology, added to a particle–tracking model (that forecasts passive transport of neutrally–buoyant particles) creates a “smart particle” or Numerical Fish Surrogate (NFS). The NFS is based on the Eulerian–Lagrangian–agent Method (ELAM). The NFS can forecast fish x, y, z, time, swim speed, and swim orientation information in 2– or 3–dimensions. The underlying “traffic rule” used by fish to navigate complex flow and water quality fields can be discovered by recursively reducing differences between forecasted paths and field observations.

    ELAM simulated fish vs. passive particles (flowlines) approaching a dam.

    Movement of Numerical Fish Surrogate (NFS) virtual fish [top] and passive particles [bottom] approaching Lower Granite Dam (Snake River, Washington USA) in virtual reality. Note the distribution of behavior within the fish population changes as the fish approach the dam. Upstream of the dam the default behavior B0 dominates, but the other behaviors become more important as the hydrodynamic environment becomes more complex near the dam.

    Cognitive analysis of complex 3–D fish movement behavior.

    [Click Here for Analysis of Specific Individual Fish]

    Project features at Lower Granite Dam on the Snake River, WA USA for 2000 studies include a Behavioral Guidance Structure (BGS) intended to guide fish to the Surface Bypass Collector (SBC) and occlude them from the 3 turbine intakes nearest the shore. The movement of an acoustically–tagged fish (real fish track) is colored green in the upper–left plot, provided by the U.S. Geological Survey.

    Population passage is the sum of the behaviors of individuals and cannot be accurately forecast unless the behavior of individuals is captured. In the first example [C], the NFS duplicates the pattern of a real fish following the trash boom without visual cues by integrating information between the total hydraulic strain and velocity fields (see below). At time t = 2120 sec the virtual fish approaching the trash boom perceives total hydraulic strain exceeding threshold k1 identifying the environmental agent as friction resistance (environmental agent A1). Agent identification triggers a sequence of events increasing the expected utility U1 (the motivational value of response B1 to stimulus agent A1). A short time later U1 exceeds utility U0 (the motivational value of the default behavior B0). Only when U1 exceeds U0 in [C] at t = 2128 sec does the behavior switch from B0 to B1. The delay between stimulus identification and observed response is the ‘response latency’, an important feature of fish behavior.

    In the second example [D], the NFS duplicates the pattern of real fish milling between the Surface Bypass Collector (SBC) and trash boom using only hydrodynamic cues. In the high–energy hydrodynamics near the SBC (see below) the virtual fish perceives total hydraulic strain exceeding k2 at t = 2928 sec in [D] (strain plot) signaling environmental agent A2. After a 50 sec latency, utility U2 exceeds U1 and the virtual fish switches to behavior B2 leading the fish upstream. Even though total hydraulic strain diminishes as it moves away from the SBC [D] (strain plot), the fish continues swimming upstream because of response latency. Perceived total hydraulic strain begins to drop significantly after the fish moves upstream of the boom just prior to t = 3200 sec and utility U2 of behavior B2 drops correspondingly. While the fish may repeatedly journey between the SBC and trash boom, the intensity of total hydraulic strain to which the fish is acclimated, Ia(t), increases with each cycle and eventually the perceived total hydraulic strain at the SBC entrance does not exceed k2. At that time, the fish would either swim with the flow (B0) or into increasing water velocity (B1), both of which would cause the fish to enter the bypass channel. The boom’s impact on the flow field dissipates with depth and, correspondingly, neither deeper swimming virtual fish nor deeper swimming tagged fish show a response (Goodwin et al., 2006).

    3–D hydraulic pattern at Lower Granite Dam.

     

     

     

    CFD model depiction of the patterns in velocity magnitude (m/s) and total hydraulic strain (s–1) for a Lower Granite Dam SBC forebay configuration in 2000. Dam operations and other information described in detail in Goodwin et al. (2006).

     

     

     

     

    3–D structured mesh CFD model.

    CFD model accuracy depends intimately on the resolution provided by the underlying mesh (upon which hydraulic information is calculated by the CFD model).

    Example to the right illustrates tessellation of a hydropower dam forebay into a structured hexahedral (8–node) element mesh. The mesh is composed of many blocks, represented here with different adjoining colors. Mesh elements are essentially distorted bricks and “near–orthogonal” meaning that each corner of the element is as close to 90° as possible.

     

    3–D unstructured mesh CFD model.

     

     

     

    Tessellation of a hydropower dam forebay into an unstructured tetrahedral (4–node) element mesh.

     

     

     

    Journal Publications
    Smith, D. L., Nestler, J. M., Johnson, G. E., and Goodwin, R. A. (2010). “Species–specific spatial and temporal distribution patterns of emigrating juvenile salmonids in the Pacific Northwest.Reviews in Fisheries Science, 18(1), 40–64.

    Nestler, J. M., Goodwin, R. A., Smith, D. L., Anderson, J. J., and Li, S. (2008). “Optimum fish passage and guidance designs are based in the hydrogeomorphology of natural rivers.River Research and Applications, 24(2), 148–168.

    Oldani, N. O., Baigún, C. R. M., Nestler, J. M., and Goodwin, R. A. (2007). “Is fish passage technology saving fish resources in the lower La Plata River basin?Neotropical Ichthyology, 5(2), 89–102.

    Baigún, C. R. M., Nestler, J. M., Oldani, N. O., Goodwin, R. A., and Weber, L. J. (2007). “Can North American fish passage tools work for South American migratory fishes?Neotropical Ichthyology. 5(2), 109–119.

    Goodwin, R. A., Nestler, J. M., Anderson, J. J., and Weber, L. J. (2007). “A new tool to forecast fish movement and passage.” Hydro Review. 26(4), 58–71.

    Weber, L. J., Goodwin, R. A., Li, S., Nestler, J. M., and Anderson, J. J. (2006). “Application of an Eulerian–Lagrangian–Agent method (ELAM) to rank alternative designs of a juvenile fish passage facility.” Journal of Hydroinformatics, 8(4), 271–295.

    Goodwin, R. A., Nestler, J. M., Anderson, J. J., Weber, L. J., and Loucks, D. P. (2006). “Forecasting 3–D fish movement behavior using a Eulerian–Lagrangian–agent method (ELAM).” Ecological Modelling, 192, 197–223.

    Refereed Conference Proceedings
    Goodwin, R. A., Nestler, J. M., Anderson, J. J., and Cheng, J.–R. (2007). “Understanding hydrodynamics from the fish’s point of view, Part I: Integrating CFD modeling, individual movement, and spatial/cognitive ecology.” Proceedings of the 6th International Symposium on Ecohydraulics, 18–23 February 2007, Christchurch, New Zealand.

    Nestler, J. M., Goodwin, R. A., Anderson, J. J., and Smith, D. L. (2007). “Understanding hydrodynamics from the fish’s point of view, Part II: Integrating flow field distortion, sensory biology, and geomorphology.” Proceedings of the 6th International Symposium on Ecohydraulics, 18–23 February 2007, Christchurch, New Zealand.

    Goodwin, R. A., Nestler, J. M., Anderson, J. J., and Weber, L. J. (2004). “Virtual fish to evaluate bypass structures for endangered species.” Proceedings of the 5th International Symposium on Ecohydraulics, 12–17 September 2004, Madrid, Spain.

    Goodwin, R. A., Nestler, J. M., Anderson, J. J., and Weber, L. J. (2004). “Forecast simulations of 3–D fish response to hydraulic structures.” Proceedings of the World Water & Environmental Resources Congress, American Society of Civil Engineers, 27 June – 1 July 2004, Salt Lake City, Utah.

    Goodwin, R. A., Anderson, J. J., and Nestler, J. M. (2004). “Decoding 3–D movement patterns of fish in response to hydrodynamics and water quality for forecast simulation.” Proceedings of the 6th International Conference on Hydroinformatics 2004, Liong, Phoon, and Babovic, eds., World Scientific Publishing Company, 21–24 June 2004, Singapore.

    Goodwin, R. A., Nestler, J. M., Weber, L., Lai, Y. G., and Loucks, D. P. (2001). “Ecologically sensitive hydraulic design for rivers: lessons learned in coupled modeling for improved fish passage.” Proceedings of ASCE Specialty Conference on Wetlands Engineering & River Restoration 2001, 25–31 August 2001, Reno, Nevada.

    Goodwin, R. A. and Nestler, J. M. (2000). “Coupled Eulerian–Lagrangian hybrid (CEL hybrid) ecological modeling and hydroinformatics.” Proceedings of 4th International Conference on Hydroinformatics, 23–27 July 2000, Cedar Rapids, Iowa.

    Reports
    Goodwin, R. A., Nestler, J. M., Anderson, J. J., Kim, J., and Toney, T. (2005). Evaluating Wanapum Dam bypass configurations for outmigrating juvenile salmon using virtual fish: Numerical Fish Surrogate (NFS) analysis. ERDC/EL TR–05–7, U.S. Army Engineer Research & Development Center, Waterways Experiment Station, Vicksburg, Mississippi 39180–6199.

    Goodwin, R. A. (2004). Hydrodynamics and juvenile salmon movement behavior at Lower Granite Dam: decoding the relationship using 3–D space–time (CEL Agent IBM) simulation. PhD Dissertation, Cornell University, Ithaca, NY. (56.3 MB)

    Nestler, J. M., Goodwin, R. A., and Chapman, R. S. (2000). Development of a Numerical Fish Surrogate for improved selection of fish passage design and operation alternatives for Lower Granite Dam: Phase I. ERDC/EL TR–00–12, U.S. Army Engineer Research & Development Center, Waterways Experiment Station, Vicksburg, Mississippi 39180–6199.

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Updated: July 2010
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